@hackage / sgrep

Sgrep - grep Fasta files for sequences matching a regular expression

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  • Last updated , by KetilMalde
  • License LicenseRef-GPL
  • Categories Bioinformatics

  • Maintained by: Ketil Malde <ketil@malde.org>

  • Lottery factor: 0

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This is a simple utility to extract sequences from Fasta files. It expects its first parameter to be a regular expression, and its second to be a Fasta-formatted file. It will then output all sequences matching the regexp to standard output.