@hackage / RNAdraw

Draw RNA secondary structures

Latest0.2.0.1

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Last updated 3 Feb 2014, by ChristianHoener
License GPL-3.0-only
Categories Bioinformatics
Maintained by: choener@tbi.univie.ac.at
Lottery factor: 0

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We provide a number of ways to draw RNA secondary structures. In particular, the following types of structures can be (more or less elegantly) drawn:

Dot plots for mfe and partition function
canonical RNA secondary structures without pseudoknots
non-canonical extended RNA secondary structures
pseudoknotted secondary structures

From top to bottom, the beauty of presentation degrades. Some emphasis is put on ASCII-drawings, especially Vienna dot-bracket-like notation.