@hackage sequenceTools1.4.0.1

A package with tools for processing next generation sequencing data, in particular for processing data from ancient DNA sequencing libraries.

Categories
- Bioinformatics
License
GPL-3.0-only
Maintainer
stephan.schiffels@mac.com
Links
- Documentation
- No source repository
- Security
Versions
- 1.6.0.0 Wed, 29 Jan 2025
- 1.5.3.1 Tue, 18 Apr 2023
- 1.5.2 Thu, 17 Feb 2022
- 1.5.0 Mon, 14 Jun 2021
- 1.4.0.5 Thu, 3 Oct 2019
- 1.4.0.4 Wed, 18 Sep 2019

Installation
In your cabal file:
Dependencies (7)
- base >=4.7 && <5
- bytestring >=0.10.8.2
- random >=1.1
- vector >=0.12.0.3
- optparse-applicative >=0.14.3.0
- pipes >=4.3.11
Dependents (0)

Key tool in this package is pileupCaller, a tool to randomly sample genotypes from sequencing data.